BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011D09SP1|AL426211
(757 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1349 1100 0.0
3x_Contig1444 378 e-105
>3x_Contig1349
Length = 5890
Score = 1100 bits (553), Expect = 0.0
Identities = 563/567 (99%), Gaps = 1/567 (0%)
Strand = Plus / Plus
Query: 1 gatcgaattgcaacagagaggwaacgatacatatttattgaacaagaagaacggacacat 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 5324 gatcgaattgcaacagagaggtaacgatacatatttattgaacaagaagaacggacacat 5383
Query: 61 tgcaagaaacaatatcggagaaacataccaagaaaactacaacgtttacgaccaattttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5384 tgcaagaaacaatatcggagaaacataccaagaaaactacaacgtttacgaccaattttt 5443
Query: 121 cggtcaacgtctcgtatcaaagacatctcatctacacactgcaaagttgtagaacggata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5444 cggtcaacgtctcgtatcaaagacatctcatctacacactgcaaagttgtagaacggata 5503
Query: 181 acaaccaaatctactctataatattcaatacgtaaatcttctaactgatccatttcattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5504 acaaccaaatctactctataatattcaatacgtaaatcttctaactgatccatttcattt 5563
Query: 241 catctcatctcaaactcatctccattgccaaccaataaataaggkagaaaagaaaaggaa 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5564 catctcatctcaaactcatctccattgccaaccaataaataaggtagaaaagaaaaggaa 5623
Query: 301 tcagcgatcacgtgactkagtcttccttctctgttacccgccctttgtctctccttagaa 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5624 tcagcgatcacgtgacttagtcttccttctctgttacccgccctttgtctctccttagaa 5683
Query: 361 aatgaaagacccgtaatctcaaagggggaaaaagtgatgatttacccagatgactgcgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5684 aatgaaagacccgtaatctcaaagggggaaaaagtgatgatttacccagatgactgcgta 5743
Query: 421 g-cacagcgaccctttggtagtaagcagcagcgagaaagctcggaaaagtaatacggaat 479
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5744 gccacagcgaccctttggtagtaagcagcagcgagaaagctcggaaaagtaatacggaat 5803
Query: 480 tttcatcggattattcaatttttggaaatcaattttcacagagagaacagaacactggat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5804 tttcatcggattattcaatttttggaaatcaattttcacagagagaacagaacactggat 5863
Query: 540 tcgataaaaacaaaaaaatataatttc 566
|||||||||||||||||||||||||||
Sbjct: 5864 tcgataaaaacaaaaaaatataatttc 5890
>3x_Contig1444
Length = 7580
Score = 378 bits (190), Expect = e-105
Identities = 191/192 (99%)
Strand = Plus / Plus
Query: 566 ccttctttttagaaagtcacttctccttgactcccataatttatctagttctttaatcat 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccttctttttagaaagtcacttctccttgactcccataatttatctagttctttaatcat 61
Query: 626 cctgtaaagatcttgtgatagcgtaaggratttcaataacacaaccattagcaggtttct 685
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 62 cctgtaaagatcttgtgatagcgtaaggaatttcaataacacaaccattagcaggtttct 121
Query: 686 ggagcactggggagaacttgttgacattcggttatacagttgtcttttttttattttttg 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggagcactggggagaacttgttgacattcggttatacagttgtcttttttttattttttg 181
Query: 746 gtcaaaaatttt 757
||||||||||||
Sbjct: 182 gtcaaaaatttt 193
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8432
Number of Sequences: 1807
Number of extensions: 8432
Number of successful extensions: 161
Number of sequences better than 1.0e-20: 2
length of query: 757
length of database: 10,358,551
effective HSP length: 16
effective length of query: 741
effective length of database: 10,329,639
effective search space: 7654262499
effective search space used: 7654262499
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)